Class AAIndexFileParser
- java.lang.Object
-
- org.biojava.nbio.core.alignment.matrices.AAIndexFileParser
-
public class AAIndexFileParser extends java.lang.Object
-
-
Constructor Summary
Constructors Constructor Description AAIndexFileParser()
-
Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description java.util.Map<java.lang.String,SubstitutionMatrix<AminoAcidCompound>>
getMatrices()
void
parse(java.io.InputStream inputStream)
parse an inputStream that points to an AAINDEX database file
-
-
-
Method Detail
-
parse
public void parse(java.io.InputStream inputStream) throws java.io.IOException
parse an inputStream that points to an AAINDEX database file- Parameters:
inputStream
-- Throws:
java.io.IOException
-
getMatrices
public java.util.Map<java.lang.String,SubstitutionMatrix<AminoAcidCompound>> getMatrices()
-
-